[Bioperl-l] Bio::Tools::Run::WrapperBase: Capture the command that is executed?

Dan Kortschak dan.kortschak at adelaide.edu.au
Mon Apr 19 17:18:04 EDT 2010


Hi Ben and Mark,

I agree that an easy way to query the parameters passed to IPC::Run
would be nice for debugging, but is it really necessary for a fairly
limited set of use cases? - 'perl -d' does a very nice job of allowing
this kind of thing.

cheers
Dan

On Mon, 2010-04-19 at 10:09 -0400, bimber at wisc.edu wrote:
> ok, that's what i thought.  whenever i need to debug something i've
> been hacking CommandExts to print @ipc_args, but that's kind of an
> ugly solution.
> 
> related to this - now that XML is supported instead of text-based
> config files, is there a subversion repository where anyone is
> gathering these files?  i saw your web-based XML generator, which is
> useful.
> 
> -ben



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