Developer accounts re-issued

[ March 23, 2006 ]

We are moving developer repository to a new server which will require you to get a new developer account. To […]

Gallery updated

[ February 18, 2006 ]

The BOSC 2002 pictures have been migrated to the O|B|F gallery site hackathon2002.

Installation files added to website

[ February 16, 2006 ]

Installation instructions for Bioperl have been added to the main Bioperl website. They have been updated with links and tags […]

More website updates

[ February 13, 2006 ]

WordPress 2.0.1 installed. Presumably no major differences to be seen but some bug fixes installed. A Wiki spam filter was […]

Discussions about modules that run…

[ February 7, 2006 ]

Some discussion about changing how the RemoteBlast module behaves. If you have feedback respond to Roger’s post. Also see these […]

BioPerl on Mac OS X…

[ January 30, 2006 ]

Instructions on how to install BioPerl on Mac OS X have been added to the Wiki, specifically at the Getting […]

Website is live

[ January 25, 2006 ]

(reposting this news from O|B|F News) I am pleased to announce the release of a new website for BioPerl. The […]

new Bioperl website

[ January 25, 2006 ]

I am pleased to announce the release of a new website for BioPerl. The site is based on the mediawiki software that was developed for the wikipedia project. We intend the site to be a place for community input on documentation and design for the BioPerl project. There is also a fair amount of documentation started surrounding bioinformatics tools and techniques applicable to using BioPerl and some of the authors who created these resources.

Publications and projects which reference…

[ January 17, 2006 ]

I’ve been updating the Publications page on the wiki to keep track of the number of pubs and projects which […]

New theme

[ January 17, 2006 ]

I installed the new Regulus theme, comments are welcome as to whether or not you like it. It is possible […]

Site software updated

[ January 11, 2006 ]

I’ve updated the wordpress install to 2.0 which has a lot more features and seems to be better setup for […]

Developer Release in FreeBSD

[ December 8, 2005 ]

The Developer Release (1.5.1) of BioPerl has been brought back into the FreeBSD Ports Collection. For instructions on how to […]

Welcome new developer

[ December 2, 2005 ]

Welcome to new developer Torsten Seemann from Victorian Bioinformatics Consortium. Torsten has taken on the role of primary maintainer of […]

media wiki upgraded

[ November 21, 2005 ]

Upgraded to mediawiki 1.5.2 — all seems to be working, but do notify us if it isn’t.

no more index.php

[ November 21, 2005 ]

index.php is no longer part of the wiki URL. Yah! So http://bioperl.open-bio.org/wiki/Project_priority_list instead of http://bioperl.open-bio.org/wiki/index.php/Project_priority_list I also installed the interwiki […]

Biblio plugin for wiki

[ November 21, 2005 ]

I added the Biblio plugin for mediawiki so that we could simplify how papers are referenced in our pages. I […]

sort order for Bio::Tree::Node each_Descendent

[ November 20, 2005 ]

I’ve updated the code for Bio::Tree::Node so that each_Descendent can return the nodes in alphabetical order. This is achieved by […]

FAQ updated

[ November 19, 2005 ]

The Frequently Asked Questions have been entered into the Wiki and is available.