August 17, 2000:
|
Time
|
Event/Talk
|
Speaker
|
1:00-2:00 |
Registration and poster setup |
2:00-2:20 |
Intro/Bioperl |
Ewan Birney
EBI |
2:30-2:50 |
BioJava |
Matt Pocock
Sanger Centre |
3:00-3:20 |
BioXML |
Brad Marshall
Berkeley |
3:30-4:00 |
Coffee break |
4:00-4:20 |
BioPython |
Jeff Chang
Stanford |
4:30-4:50 |
BioCorba |
Jason Staitich
Duke |
5:00-5:20 |
Ensembl |
Michele Clamp
Sanger Centre |
6:00 |
Dinner @ UCSD |
8:00-10:00 |
Ad hoc meetings & BOF gatherings |
August 18, 2000:
|
Time
|
Event/Talk
|
Speaker
|
9:00-10:00 |
Keynote |
Tim O'Reilly
O'Reilly & Associates |
10:00-10:30 |
Coffee break |
10:30-10:50 |
Distributing bioinformatics applications with Piper |
J.W. Bizarro
University of Massachusetts Lowell |
11:00-11:20 |
Exploiting emerging open I/O protocols for high-throughput BioAnalysis |
Lawrence Lau
University of Queensland |
11:30-11:50 |
An introduction to Genome Annotation Markup Elements (GAME) XML |
Suzanna Lewis
Berkeley Drosophila Genome Project |
12:00-2:00 |
Lunch and poster session |
2:00-2:20 |
A distributed annotation system client |
Robin Dowell
Washington University, St. Louis |
2:30-2:50 |
Telegraph: A free library for probabilistic sequence analysis |
Ian Holmes
Berkeley Drosophila Genome Project |
3:00-3:30 |
Coffee break |
3:30-3:50 |
E-CELL: Simulation environment for whole cell simulation |
Kouichi Takahashi
Keio University |
4:00-4:20 |
FAKtory: An Open Source DNA fragment assembly system |
Nirav Merchant
University of Arizona, Tucson |
4:30-5:15 |
Keynote |
Lincoln Stein
Cold Spring Harbor Labs |
5:30 |
Discussion of the legal implications of open source. |