About the OBF
The Open Bioinformatics Foundation (OBF) is a non-profit, volunteer-run group that promotes open source software development and Open Science within the biological research community. Membership in the OBF is free and open to anyone who wants to help promote open source or open science in a biological field.
OBF runs the annual Bioinformatics Open Source Conference (BOSC).
BOSC 2025 will be July 21-22, 2025, in Liverpool, UK (as part of ISMB/ECCB 2025). BOSC 2024 took place July 15-16, 2024, as part of ISMB 2024 in Montréal, Canada.
OBF Event Awards
The OBF Event Fellowship program aims to increase diverse participation at events promoting open source bioinformatics software development and open science in the biological research community.
The call for applications for the OBF Event Fellowship 2022, round 2 is now open. The deadline for this round is 1 October 2022. Applications should be submitted via this Google Form. We have provided a Word template to help you draft the application locally before filling the form – make a copy of this template.
We invite applications from candidates who are seeking financial support to attend or host relevant scientific events from late October 2022 to April 2023.
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Festus Nyasimi: Journey to the ISMB/BOSC 2022 conference
The Open Bioinformatics Foundation (OBF) Event Fellowship program aims to promote diverse participation at events promoting open source bioinformatics software development and open science practices in the biological research community. Festus Nyasimi, A co-founder and lead of the Bioinformatics Hub of Kenya Initiative (BHKi), attended the ISMB/BOSC conference 2022, supported by this fellowship granted to him in the first round of 2022.
In mid-May, I attended a different conference where I shared my experience with community building in the bioinformatics space with one of the attendees.
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Reflections from my 3 years on the OBF Board - Malvika Sharan
Thank You. Photo by Aaron Burden on Unsplash
I have reached the end of my term after working with the OBF board members since 2019 and have stepped down from the board. It is bittersweet! I will miss seeing my colleagues from OBF in monthly calls, but also, this comes with an opportunity to make space for new voices to come into the leadership role of the Open Bioinformatics Foundation.
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My trip to the EMBO neural stem cells workshop
The Open Bioinformatics Foundation (OBF) Event Fellowship program aims to promote diverse participation at events promoting open source bioinformatics software development and open science practices in the biological research community. Jemima Becker, DPhil student at Merton College, University of Oxford, attended the EMBO workshop: “Neural stem cells: From basic understanding to translational applications", supported by this fellowship granted to him in the first round of 2022.
This June, I had the opportunity to travel to the EMBO workshop: “Neural stem cells: From basic understanding to translational applications”.
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Furkan M. Torun: Highlights of my participation at PyCon IT 2022
The Open Bioinformatics Foundation (OBF) Event Fellowship program aims to promote diverse participation at events promoting open source bioinformatics software development and open science practices in the biological research community. Furkan M. Torun, Data Scientist at OmicEra Diagnostics & Computational Biologist, attended the PyCon Italia 2022, supported by this fellowship granted to him in the first round of 2022.
Background As it is shown in the surveys of the programming languages used and the latest publications in the field of bioinformatics/computational biology, Python has experienced unprecedented growth.
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Post-BOSC CoFest will be online
’ello Co-Fest Friends!
After failing to find a good spot for an in-person CoFest, we decided to have the CoFest remotely! I was really excited to meet you all at this event (and have you all meet each other) in the real world, but we’ll have to settle for doing that at BOSC (for those who are there).
By all means, don’t let this stop your in-person innovations! Want to meet up and work at a café?
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CollaborationFest 2022
Guest post by Thomas Schlapp, CoFest organizer This year we’re looking to have another post-BOSC CoFest! Last year (my first year being involved in BOSC at all) showed me just how collaborative and innovative this community can be. I’d absolutely LOVE to see more of it again. Last year we saw six very fascinating projects see progress (look them over HERE!). Let’s see if we cannot do just a few more in the name of innovation and collaboration!
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BOSC and Bio-Ontologies: Even better together!
We are excited to announce that BOSC and Bio-Ontologies will join forces for part of a day at ISMB 2022. The joint session will include talks chosen from abstracts submitted to BOSC or Bio-Ontologies, plus a keynote speaker who is well known in both the ontology and open science communities!
BOSC and Bio-Ontologies are two of the longest-running COSIs (Communities of Special Interest) at ISMB: BOSC started in 2000 and Bio-Ontologies in 1998.
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Watch the recording of the ISCBacademy webinar on growing open source communities
Yesterday we hosted the OBF/BOSC contribution to the ISCBacademy webinar. Our former OBF-board member and Open Life Science co-lead Yo Yehudi presented how internship programs such as Google Summer of Code or Outreachy can be a great way to grow your open source community. If you missed the event, you can now watch the recording on YouTube.
Lalit Narayan, who is an undergraduate student at the Indian Institute of Technology Mandi, was a first-time webinar attendee:
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Call for applications for OBF Event Fellowship, Round 1 of 2022
Announcement drafted by Malvika Sharan, Caleb Kibet and Hilya Zahroh, with the OBF Board’s input.
The call for applications for the OBF Event Fellowship 2022, round 1 is now open. The deadline for this round is 1 April 2022. Applications should be submitted via this Google Form. We have provided a Word template to help you draft the application locally before filling the form – make a copy of this template.
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