Please visit our ***NEW*** OBF/BOSC website: https://www.open-bio.org/ |
-
Difference between revisions of "BOSC 2008 schedule"
Line 360: | Line 360: | ||
Arial'>Schedule (Day 2)</span></b></p> | Arial'>Schedule (Day 2)</span></b></p> | ||
− | <p class=MsoNormal | + | <p class=MsoNormal></p> |
<table class=MsoTableGrid border=1 cellspacing=0 cellpadding=0 | <table class=MsoTableGrid border=1 cellspacing=0 cellpadding=0 | ||
Line 370: | Line 370: | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
− | style='font-size:11.0pt'>Saturday, July 19 | + | style='font-size:11.0pt'>Saturday, July 19</span></b></p> |
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
− | style='font-size:11.0pt' | + | style='font-size:11.0pt'></span></b></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 379: | Line 379: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>9:00-9:05 | + | <p class=MsoNormal><span style='font-size:11.0pt'>9:00-9:05</span></p> |
</td> | </td> | ||
<td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
Line 385: | Line 385: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Kam Dahlquist | + | <p class=MsoNormal><span style='font-size:11.0pt'>Kam Dahlquist</span></p> |
− | <p class=MsoNormal><span style='font-size:11.0pt' | + | <p class=MsoNormal><span style='font-size:11.0pt'></span></p> |
</td> | </td> | ||
<td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
Line 392: | Line 392: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Announcements | + | <p class=MsoNormal><span style='font-size:11.0pt'>Announcements</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 399: | Line 399: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>9:05-9:30 | + | <p class=MsoNormal><span style='font-size:11.0pt'>9:05-9:30</span></p> |
</td> | </td> | ||
<td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
Line 405: | Line 405: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Mark Wilkinson | + | <p class=MsoNormal><span style='font-size:11.0pt'>Mark Wilkinson</span></p> |
</td> | </td> | ||
<td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
Line 412: | Line 412: | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
<p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Interoperability | <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Interoperability | ||
− | with BioMoby – Past, Present, and Future | + | with BioMoby – Past, Present, and Future</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 419: | Line 419: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>9:30-9:55 | + | <p class=MsoNormal><span style='font-size:11.0pt'>9:30-9:55</span></p> |
</td> | </td> | ||
<td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
Line 425: | Line 425: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Joshua Orvis | + | <p class=MsoNormal><span style='font-size:11.0pt'>Joshua Orvis</span></p> |
</td> | </td> | ||
<td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
Line 433: | Line 433: | ||
<p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Ergatis: A | <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Ergatis: A | ||
Web-based Bioinformatics Pipeline Management and Collaborative Development | Web-based Bioinformatics Pipeline Management and Collaborative Development | ||
− | System | + | System</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 440: | Line 440: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>9:55-10:15 | + | <p class=MsoNormal><span style='font-size:11.0pt'>9:55-10:15</span></p> |
</td> | </td> | ||
<td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
Line 446: | Line 446: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Aleksi Kallio | + | <p class=MsoNormal><span style='font-size:11.0pt'>Aleksi Kallio</span></p> |
</td> | </td> | ||
<td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
Line 453: | Line 453: | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
<p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Chipster – User | <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Chipster – User | ||
− | Friendly DNA Microarray Analysis Software | + | Friendly DNA Microarray Analysis Software</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 461: | Line 461: | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
− | style='font-size:11.0pt'>10:15-10:45 | + | style='font-size:11.0pt'>10:15-10:45</span></b></p> |
</td> | </td> | ||
<td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
Line 468: | Line 468: | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
− | style='font-size:11.0pt'>Coffee Break | + | style='font-size:11.0pt'>Coffee Break</span></b></p> |
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
− | style='font-size:11.0pt' | + | style='font-size:11.0pt'></span></b></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 477: | Line 477: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>10:45-11:10 | + | <p class=MsoNormal><span style='font-size:11.0pt'>10:45-11:10</span></p> |
</td> | </td> | ||
<td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
Line 483: | Line 483: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Jiten Bhagat | + | <p class=MsoNormal><span style='font-size:11.0pt'>Jiten Bhagat</span></p> |
</td> | </td> | ||
<td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
Line 490: | Line 490: | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
<p class=MsoNormal><span style='font-size:11.0pt'>[workflows] myExperiment: | <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] myExperiment: | ||
− | Social Software for Sharing Workflows | + | Social Software for Sharing Workflows</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 497: | Line 497: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>11:10-11:30 | + | <p class=MsoNormal><span style='font-size:11.0pt'>11:10-11:30</span></p> |
</td> | </td> | ||
<td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
Line 503: | Line 503: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Todd Smith | + | <p class=MsoNormal><span style='font-size:11.0pt'>Todd Smith</span></p> |
</td> | </td> | ||
<td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
Line 510: | Line 510: | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
<p class=MsoNormal><span style='font-size:11.0pt'>[workflows] BioHDF: Open Binary | <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] BioHDF: Open Binary | ||
− | File Formats for Large Scale Data Management | + | File Formats for Large Scale Data Management</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 517: | Line 517: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>11:30-11:50 | + | <p class=MsoNormal><span style='font-size:11.0pt'>11:30-11:50</span></p> |
</td> | </td> | ||
<td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
Line 523: | Line 523: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Aaron Kitzmiller | + | <p class=MsoNormal><span style='font-size:11.0pt'>Aaron Kitzmiller</span></p> |
</td> | </td> | ||
<td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
Line 531: | Line 531: | ||
<p class=MsoNormal><span style='font-size:11.0pt'>[open source software] The | <p class=MsoNormal><span style='font-size:11.0pt'>[open source software] The | ||
Open HeliSphere<sup>TM</sup> Project: True Open Source from the Inventors of | Open HeliSphere<sup>TM</sup> Project: True Open Source from the Inventors of | ||
− | True Single Molecule Sequencing | + | True Single Molecule Sequencing</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 538: | Line 538: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>11:50-12:10 | + | <p class=MsoNormal><span style='font-size:11.0pt'>11:50-12:10</span></p> |
</td> | </td> | ||
<td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
Line 544: | Line 544: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Ed Lee | + | <p class=MsoNormal><span style='font-size:11.0pt'>Ed Lee</span></p> |
</td> | </td> | ||
<td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
Line 551: | Line 551: | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
<p class=MsoNormal><span style='font-size:11.0pt'>[open source software] | <p class=MsoNormal><span style='font-size:11.0pt'>[open source software] | ||
− | Apollo: a Sequence Annotation Editor (with demonstration to follow) | + | Apollo: a Sequence Annotation Editor (with demonstration to follow)</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 559: | Line 559: | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
− | style='font-size:11.0pt'>12:30-1:30 | + | style='font-size:11.0pt'>12:30-1:30</span></b></p> |
</td> | </td> | ||
<td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
Line 566: | Line 566: | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
− | style='font-size:11.0pt'>Lunch | + | style='font-size:11.0pt'>Lunch</span></b></p> |
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
− | style='font-size:11.0pt' | + | style='font-size:11.0pt'></span></b></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 575: | Line 575: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>1:30-1:50 | + | <p class=MsoNormal><span style='font-size:11.0pt'>1:30-1:50</span></p> |
</td> | </td> | ||
<td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
Line 581: | Line 581: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Hilmar Lapp | + | <p class=MsoNormal><span style='font-size:11.0pt'>Hilmar Lapp</span></p> |
</td> | </td> | ||
<td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
Line 588: | Line 588: | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
<p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] BioSQL | <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] BioSQL | ||
− | Reloaded: 1.0 Release, PhyloDB Module, and Future Features | + | Reloaded: 1.0 Release, PhyloDB Module, and Future Features</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 595: | Line 595: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>1:50-2:10 | + | <p class=MsoNormal><span style='font-size:11.0pt'>1:50-2:10</span></p> |
</td> | </td> | ||
<td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
Line 601: | Line 601: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Syed Haider | + | <p class=MsoNormal><span style='font-size:11.0pt'>Syed Haider</span></p> |
− | <p class=MsoNormal><span style='font-size:11.0pt' | + | <p class=MsoNormal><span style='font-size:11.0pt'></span></p> |
</td> | </td> | ||
<td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
Line 609: | Line 609: | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
<p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] EMBRACE – | <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] EMBRACE – | ||
− | BioMart Developments and Future | + | BioMart Developments and Future</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 616: | Line 616: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>2:10-2:30 | + | <p class=MsoNormal><span style='font-size:11.0pt'>2:10-2:30</span></p> |
</td> | </td> | ||
<td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
Line 622: | Line 622: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Tiago Antão | + | <p class=MsoNormal><span style='font-size:11.0pt'>Tiago Antão </span></p> |
− | <p class=MsoNormal><span style='font-size:11.0pt' | + | <p class=MsoNormal><span style='font-size:11.0pt'></span></p> |
</td> | </td> | ||
<td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
Line 630: | Line 630: | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
<p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] Biopython | <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] Biopython | ||
− | Project Update | + | Project Update</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 637: | Line 637: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>2:30-3:30 | + | <p class=MsoNormal><span style='font-size:11.0pt'>2:30-3:30</span></p> |
</td> | </td> | ||
<td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
Line 643: | Line 643: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Lightning Talks/Demos/BOFs | + | <p class=MsoNormal><span style='font-size:11.0pt'>Lightning Talks/Demos/BOFs</span></p> |
<p class=MsoNormal><span style='font-size:11.0pt'>See | <p class=MsoNormal><span style='font-size:11.0pt'>See | ||
− | <http://www.open-bio.org/wiki/BOSC_2008_schedule> for updated listings | + | <http://www.open-bio.org/wiki/BOSC_2008_schedule> for updated listings</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 653: | Line 653: | ||
padding:0in 5.4pt 0in 5.4pt;height:4.45pt'> | padding:0in 5.4pt 0in 5.4pt;height:4.45pt'> | ||
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
− | style='font-size:11.0pt'>3:30-4:00 | + | style='font-size:11.0pt'>3:30-4:00</span></b></p> |
</td> | </td> | ||
<td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
Line 660: | Line 660: | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt;height:4.45pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt;height:4.45pt'> | ||
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
− | style='font-size:11.0pt'>Coffee Break | + | style='font-size:11.0pt'>Coffee Break</span></b></p> |
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
− | style='font-size:11.0pt' | + | style='font-size:11.0pt'></span></b></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Line 669: | Line 669: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0in 5.4pt 0in 5.4pt'> | padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>4:00-5:30 | + | <p class=MsoNormal><span style='font-size:11.0pt'>4:00-5:30</span></p> |
</td> | </td> | ||
<td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
Line 675: | Line 675: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
− | <p class=MsoNormal><span style='font-size:11.0pt'>Lightning Talks/Demos/BOFs | + | <p class=MsoNormal><span style='font-size:11.0pt'>Lightning Talks/Demos/BOFs</span></p> |
− | <p class=MsoNormal><span style='font-size:11.0pt' | + | <p class=MsoNormal><span style='font-size:11.0pt'></span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
</table> | </table> |
Revision as of 21:23, 9 June 2008
Schedule (Day 1)
Friday, July18
|
||
9:00-9:15 |
Kam Dahlquist (Chair BOSC 2008) Jason Stajich (President O|B|F) |
[welcome] Open Bioinformatics Foundation Update |
9:15-10:15 |
Julian Lombardi |
[keynote] Croquet: An Open Collaboration Architecture for Scientific Visualization and Simulation |
10:15-10:45 |
Coffee Break
|
|
10:45-11:05 |
Hervé Ménager |
[cyberinfrastructure] Mobyle: a New Full Web Bioinformatics Framework |
11:05-11:30 |
Richard Smith |
[cyberinfrastructure] Intermine – Open Source Data Warehouse and Query Interface |
11:30-12:05 |
Paul Gordon |
[cyberinfrastructure] Bridging Existing Bioinformatics Tools and Data into Semantic Web Services |
12:05-12:25 |
Peter Rice |
[cyberinfrastructure] Soaplab2: More Reliable Sesame Door to Bioinformatics Programs |
12:30-1:30 |
Lunch
|
|
1:30-1:50 |
Barry Sanders & David Arcoleo |
[cyberinfrastructure] BeeSpace: An Interactive System for Functional Analysis |
1:50-2:10 |
Andrew Jenkinson
|
[cyberinfrastructure] BioDas Project Update |
2:10-2:30 |
Kazuharu Arakawa |
[visualization] E-Cell 3D: 3-Dimensional Visualization of Dynamic Cell Simulation |
2:30-2:50 |
Peter Rice |
[bio*update] EMBOSS: European Molecular Biology Open Software Suite |
2:50-3:10 |
Michael Heuer
|
[bio*update] BioJava Project Update |
3:10-3:15 |
Justin Wilson |
[lightning talk] Use the Make Utility for the Maintenance of Complex Bioinformatics Pipelines |
3:15-3:30 |
Additional Lightning Talks/Demos/Birds of a Feather See <http://www.open-bio.org/wiki/BOSC_2008_schedule> for updated listings |
|
3:30-4:00 |
Coffee Break
|
|
4:00-5:30 |
Lightning Talks/Demos/BOFs
|
Schedule (Day 2)
Saturday, July 19
|
||
9:00-9:05 |
Kam Dahlquist
|
Announcements |
9:05-9:30 |
Mark Wilkinson |
[workflows] Interoperability with BioMoby – Past, Present, and Future |
9:30-9:55 |
Joshua Orvis |
[workflows] Ergatis: A Web-based Bioinformatics Pipeline Management and Collaborative Development System |
9:55-10:15 |
Aleksi Kallio |
[workflows] Chipster – User Friendly DNA Microarray Analysis Software |
10:15-10:45 |
Coffee Break
|
|
10:45-11:10 |
Jiten Bhagat |
[workflows] myExperiment: Social Software for Sharing Workflows |
11:10-11:30 |
Todd Smith |
[workflows] BioHDF: Open Binary File Formats for Large Scale Data Management |
11:30-11:50 |
Aaron Kitzmiller |
[open source software] The Open HeliSphereTM Project: True Open Source from the Inventors of True Single Molecule Sequencing |
11:50-12:10 |
Ed Lee |
[open source software] Apollo: a Sequence Annotation Editor (with demonstration to follow) |
12:30-1:30 |
Lunch
|
|
1:30-1:50 |
Hilmar Lapp |
[bio*update] BioSQL Reloaded: 1.0 Release, PhyloDB Module, and Future Features |
1:50-2:10 |
Syed Haider
|
[bio*update] EMBRACE – BioMart Developments and Future |
2:10-2:30 |
Tiago Antão
|
[bio*update] Biopython Project Update |
2:30-3:30 |
Lightning Talks/Demos/BOFs See <http://www.open-bio.org/wiki/BOSC_2008_schedule> for updated listings |
|
3:30-4:00 |
Coffee Break
|
|
4:00-5:30 |
Lightning Talks/Demos/BOFs
|