Revision as of 23:17, 7 March 2008

The 9th annual Bioinformatics Open Source Conference (BOSC 2008) will take place in Toronto, Ontario, Canada, as one of several Special Interest Group (SIG) meetings occurring in conjunction with the 16th annual Intelligent Systems for Molecular Biology Conference (ISMB 2008).

Overview

The Bioinformatics Open Source Conference (BOSC) is sponsored by the Open Bioinformatics Foundation (O|B|F), a non-profit group dedicated to promoting the practice and philosophy of Open Source software development within the biological research community. Many Open Source bioinformatics packages are widely used by the research community across many application areas and form a cornerstone in enabling research in the genomic and post-genomic era. Open source bioinformatics software has facilitated rapid innovation and dissemination of new computational methods as well as informatics infrastructure. Since the work of the Open Source Bioinformatics Community represents some of the most cutting edge of Bioinformatics in general, the overall themes for the conference this year are emerging technologies and hard problems in bioinformatics. Topics under this umbrella include infrastructure and data modeling, web 2.0 technologies, workflows, visualization, and best practices of software design and engineering. We will also have a series of update talks about the main Open Source Bioinformatics Software suites. One of the hallmarks of BOSC is the coming together of the open source developer community in one location. A face-to-face meeting of this community creates synergy where participants can work together to create use cases, prototype working code, or run bootcamps for developers from other projects as short, informal, and hands-on tutorials in new software packages and emerging technologies. In short, BOSC is not just a conference for presentations of completed work, but is a dynamic meeting where collaborative work gets done.

Important Dates

March 10: Call for speakers and abstracts opens.

May 11: Abstract submission deadline.

June 2: Notification of accepted talks.

June 4: Early registration discount cut-off.

July 18-19: BOSC 2008!

Call for Speakers and Abstracts

The call for speakers and abstracts will open on Monday, March 10.

Notes on Submissions

The Open Bioinformatics Foundation, which is the sole sponsor of BOSC, is dedicated to promoting the practice and philosophy of Open Source Software Development within the Biological Research Community. For this reason, in order to be considered for acceptance, any talk submitted to be presented at BOSC which concerns a specific software system to be used by the research community must be licensed with a recognized Open Source License, and be available for download by anyone using ftp, cvs/subversion, or as a tar/zip file from the Project Website.

See the following websites for further details:

• Recognized Open Source Licenses
• Definition of the Open Source Philosophy

Registration

Please see the ISMB registration site for details. Online registration opened March 6, 2008.

Contact

For more information, contact the organizers, Kam Dahlquist and Darin London, at bosc@open-bio.org.

NOTE: Abstracts submissions will not be accepted via e-mail this year. All abstracts must be submitted through the Open Conference Systems interface which will open Monday, March 10, 2008.