Please visit our ***NEW*** OBF/BOSC website: https://www.open-bio.org/ |
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Difference between revisions of "Help:FAQ"
From Open Bioinformatics Foundation
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== How do I cite an O|B|F project in my publication? == | == How do I cite an O|B|F project in my publication? == | ||
− | * Overall view of the Bio* projects | + | * Overall view of the Bio* projects <cite>mangalam</cite> |
* [http://www.biojava.org BioJava] - cite the [http://biojava.org/ project website] | * [http://www.biojava.org BioJava] - cite the [http://biojava.org/ project website] | ||
− | * [[bp:BioPerl|BioPerl]] | + | * [[bp:BioPerl|BioPerl core]] and [[bp:PopGen modules|Population genetics modules]] <cite>bioperl,perlymorphism</cite> also see [[bp:BioPerl publications|BioPerl Publications]] |
− | * [http://biopipe.org BioPipe] - | + | * [http://biopipe.org BioPipe] which uses bioperl-run <cite>biopipe</cite> |
* [http://www.biopython.org BioPython] - cite the [http://biopython.org/ project website] | * [http://www.biopython.org BioPython] - cite the [http://biopython.org/ project website] | ||
* [http://www.bioruby.org BioRuby] - no publication details available | * [http://www.bioruby.org BioRuby] - no publication details available | ||
* BioSQL - see OBDA below | * BioSQL - see OBDA below | ||
+ | |||
== How do I cite an O|B|F affiliated project in my publication? == | == How do I cite an O|B|F affiliated project in my publication? == | ||
− | * [http://www.biodas.org DAS] | + | * [http://www.biodas.org DAS] <cite>das</cite> |
− | * [http://www.biomoby.org MOBY] | + | * [http://www.biomoby.org MOBY] <cite>moby</cite> |
− | * [http://www.emboss.org EMBOSS] | + | * [http://www.emboss.org EMBOSS] <cite>emboss</cite> |
− | * [http://obda.open-bio.org OBDA] - | + | * [http://obda.open-bio.org OBDA] - (Lapp et al, ''in prep'') |
− | * [http://www.gmod.org/ggb Generic Genome Browser] | + | * [http://www.gmod.org/ggb Generic Genome Browser] <cite>gbrowse</cite> |
* [http://www.gmod.org/schema/ Chado] - no publication details available | * [http://www.gmod.org/schema/ Chado] - no publication details available | ||
− | * [http://www.pasteur.fr/recherche/unites/sis/Pise/ Pise] | + | * [http://www.pasteur.fr/recherche/unites/sis/Pise/ Pise] <cite>pise</cite> |
− | * [http:// | + | * [http://www.ebi.ac.uk/~senger/openbqs/ openBQS] - no publication details available |
* [http://blipkit.org BlipKit] - no publication details available | * [http://blipkit.org BlipKit] - no publication details available | ||
− | * [http://skam.sourceforge.net/ BioMake & Skam] | + | * [http://skam.sourceforge.net/ BioMake & Skam] |
+ | |||
== How do I cite an O|B|F related project in my publication? == | == How do I cite an O|B|F related project in my publication? == | ||
* [http://biophp.org BioPHP] - no publication details available | * [http://biophp.org BioPHP] - no publication details available | ||
− | * [http://www.yandell-lab.org/cgl/ CGL] - | + | * [http://www.yandell-lab.org/cgl/ Comparative Genomics Library] and [[bp:CGL|CGL Wiki page]]- (Yandell et al, ''in prep'') |
+ | ==References== | ||
+ | <biblio> | ||
+ | #mangalam pmid=12230038 | ||
+ | #bioperl pmid=12368254 | ||
+ | #perlymorphism pmid=15356276 | ||
+ | #biopipe pmid=12869579 | ||
+ | #pise pmid=12511068 | ||
+ | #gbrowse pmid=12368253 | ||
+ | #emboss pmid=12002227 | ||
+ | #moby pmid=12511062 | ||
+ | #das pmid=11667947 | ||
+ | </biblio> |
Latest revision as of 13:18, 9 April 2008
Contents
How do I cite an O|B|F project in my publication?
- Overall view of the Bio* projects mangalam
- BioJava - cite the project website
- BioPerl core and Population genetics modules bioperl,perlymorphism also see BioPerl Publications
- BioPipe which uses bioperl-run biopipe
- BioPython - cite the project website
- BioRuby - no publication details available
- BioSQL - see OBDA below
How do I cite an O|B|F affiliated project in my publication?
- DAS das
- MOBY moby
- EMBOSS emboss
- OBDA - (Lapp et al, in prep)
- Generic Genome Browser gbrowse
- Chado - no publication details available
- Pise pise
- openBQS - no publication details available
- BlipKit - no publication details available
- BioMake & Skam
- BioPHP - no publication details available
- Comparative Genomics Library and CGL Wiki page- (Yandell et al, in prep)
References
<biblio>
- mangalam pmid=12230038
- bioperl pmid=12368254
- perlymorphism pmid=15356276
- biopipe pmid=12869579
- pise pmid=12511068
- gbrowse pmid=12368253
- emboss pmid=12002227
- moby pmid=12511062
- das pmid=11667947
</biblio>