Difference between revisions of "Projects"

Latest revision as of 20:54, 9 January 2019

BioJS - an open-source library of JavaScript components to visualise biological data
BioHaskell home page, releases
Biocaml - bioinformatics library in the functional programming language OCaml
BioPHP
BioSmalltalk - Bioinformatics in a pure objects environment
CGL - Comparative Genomics Library
BioMake & Skam - Task management tool, similar to makefiles

Cyclone - provides an open source Java API to the pathway tool BioCyc.
GO-Perl - parsers and object model for OBO ontologies
Chaos-XML - File format based on the sequence modules of the Chado relational schema
Sequence Ontology
Gene Ontology
Obol

MOBY - a system for interoperability between biological data hosts and analytical services
OBDA - Standardization of access to sequence data resources.
Wikiomics - Bioinformatics wiki
Pise - a tool to generate Web interfaces software for submitting jobs to these interfaces
OpenBQS - Bibliographic query system
BioClipse - visual platform based on Eclipse
BioWeka
BlipKit - Chris Mungall's Prolog toolkit for Bioinformatics and BioMedical Informatics
Biolib - cross-project/language C bindings for a shared codebase across the different Bio* projects (Pjotr Prins)

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 ==In Memorium==
+* [http://biomoby.open-bio.org MOBY] - a system for interoperability between biological data hosts and analytical services
+* [http://obda.open-bio.org OBDA] - Standardization of access to sequence data resources.
 * [http://wikiomics.org Wikiomics] - Bioinformatics wiki
 * [http://www.pasteur.fr/recherche/unites/sis/Pise/ Pise] - a tool to generate Web interfaces software for submitting jobs to these interfaces