Difference between revisions of "Projects"

Revision as of 01:44, 16 January 2006

Generic Genome Browser - part of GMOD
Chado - The GMOD DB schema
Pise - a tool to generate Web interfaces software for submitting jobs to these interfaces
openBQS - Bibliographic query system
BlipKit - Chris Mungall's Prolog toolkit for Bioinformatics and BioMedical Informatics
BioMake & Skam - Task management tool, similar to makefiles

Chaos-XML - File format based on the sequence modules of the Chado relational schema
Sequence Ontology
Gene Ontology
Wikiomics
Obol

@@ Line 12: / Line 12: @@
 ==Affiliated projects==
 * [http://www.gmod.org/ggb Generic Genome Browser] - part of [http://www.gmod.org GMOD]
-* [http://www.pasteur.fr/recherche/unites/sis/Pise/ Pise]
+* [http://www.gmod.org/schema/ Chado] - The GMOD DB schema
-* [http://industry.ebi.ac.uk/openBQS/ openBQS]
+* [http://www.pasteur.fr/recherche/unites/sis/Pise/ Pise] - a tool to generate Web interfaces software for submitting jobs to these interfaces
+* [http://industry.ebi.ac.uk/openBQS/ openBQS] - Bibliographic query system
+* [http://blipkit.org BlipKit] - Chris Mungall's Prolog toolkit for Bioinformatics and BioMedical Informatics
+* [http://skam.sourceforge.net/ BioMake &amp; Skam] - Task management tool, similar to makefiles
+==Other related projects==
+* [http://biophp.org BioPHP]
+* [http://www.yandell-lab.org/cgl/ CGL] - Comparative Genomics Library
+==Ontologies and Definitions==
+* [http://www.fruitfly.org/chaos-xml/ Chaos-XML] - File format based on the sequence modules of the Chado relational schema
+* [http://song.sourceforge.net/ Sequence Ontology]
+* [http://geneontology.org/ Gene Ontology]
+* [http://wikiomics.org Wikiomics]
+* [http://www.fruitfly.org/~cjm/obol/ Obol]