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Difference between revisions of "BOSC 2017 Posters"
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Revision as of 06:06, 19 June 2017
All BOSC posters will be displayed for the two days of BOSC (July 22-23). ISMB requests that the presenters of even-numbered posters stand by their posters the first day, and odd-numbered poster presenters stand by their posters on the second day. Your poster must be no more than 0.95 m wide x 1.30 m high.
Poster abstracts can be found in the complete program (available soon).
| Poster # | Presenter | Title |
|---|---|---|
| 1 | Monther Alhamdoosh | An ensemble approach for gene set testing analysis with reporting capabilities |
| 2 | Wei Wang | Aztec: Automated Biomedical Tool Index with Improved Information Retrieval System |
| 3 | Rishi Nag | Bio::DB::HTS - accessing HTSlib from Perl |
| 4 | John Fonner | BioContainers for supercomputers: 2,000+ accessible, discoverable Singularity apps" |
| 5 | Carole Goble | Bioschemas for life science data |
| 6 | Jiwen Xin | BioThings Explorer: Utilizing JSON-LD for Linking Biological APIs to Facilitate Knowledge Discovery |
| 7 | Chunlei Wu | BioThings SDK: a toolkit for building high-performance data APIs in biology |
| 8 | Matúš Kalaš | BioJSON | BioYAML - Towards unified formats for sequences, alignments, features, and annotations" |
| 9 | Felix Shaw | Collaborative Open Plant Omics: A platform for "FAIR" data for plant science |
| 10 | Daria Iakovishina | CueSea: quality control tool for Illumina genotyping microarray data, with correction on intensity, clusterization and biological specificity." |
| 11 | Stian Soiland-Reyes | CWL Viewer: The Common Workflow Language Viewer |
| 12 | Farah Khan | CWL+Research Object == Complete Provenance |
| 13 | Alberto Riva | DAMON, an open source framework for reliable and reproducible analysis pipelines" |
| 14 | Tazro Ohta | Databases to support reanalysis of public high-throughput DNA sequencing data |
| 15 | Phillippe Rocca-Serra | Discovering datasets with DATS in DataMed |
| 16 | Anil S. Thanki | Discovery and visualisation of homologous genes and gene families using Galaxy |
| 17 | Herve Menager | EDAM - The ontology of bioinformatics operations, types of data, topics, and data formats (2017 update)" |
| 18 | Stephen Lincoln | Emerging public databases of clinical genetic test results: Implications for large scale deployment of precision medicine |
| 19 | Stefan A. POPA | Enabling the optimization of open-source biological computational tools with scripting languages |
| 20 | Yo Yehudi | Forever in BlueGenes: a next-generation genomic data interface powered by InterMine |
| 21 | Kate Voss | Full-stack genomics pipelining with GATK4 + WDL + Cromwell |
| 22 | Kees van Bochove | Gene Set Variation Analysis in cBioPortal |
| 23 | Ismail Moghul | GeoDiver: Differential Gene Expression Analysis & Gene-Set Analysis for GEO Datasets |
| 24 | Silvia Di Giorgio | GRADitude: A computational tool for the analysis of Grad-seq data |
| 25 | Aditya Bharadwaj | GRAPHSPACE: Stimulating interdisciplinary collaborations in network biology |
| 26 | Ted Liefeld | Integrating cloud storage providers for genomic analyses |
| 27 | Wiktor Jurkowski | Introducing the Brassica Information Portal: Towards integrating genotypic and phenotypic Brassica crop data |
| 28 | Nikola Tesic | Microsatellite instability profiling of TCGA colorectal adenocarcinomas using a Common Workflow Language pipeline |
| 29 | Rickard Hammarén | NGI-RNAseq - a best practice analysis pipeline in Nextflow |
| 30 | Alexander S Rose | NGL - a molecular graphics library for the web |
| 31 | Luis Pedro Coelho | NGLESS: Perfectly understandable and reproducible metagenomics pipelines using a domain-specific language |
| 32 | Madeleine Ball | Open Humans: Opening human health data |
| 33 | Ngoc-Vinh Tran | PhyloProfile: an interactive and dynamic visualization tool for multi-layered phylogenetic profiles |
| 34 | Rabie Saidi | Protein Inpainter: a Message-Passing-based Predictor using Spark GraphX |
| 35 | Nivethika Mahasivam | RADAR-CNS - Research Infrastructure for processing wearable data to improve health |
| 36 | Ricardo Wurmus | Reproducible and user-controlled software management in HPC with GNU Guix |
| 37 | Evanthia Kaimaklioti | Reproducing computational experiments in situ as an interactive figure in a journal article. |
| 38 | Keiichiro Ono | Revitalizing a classic bioinformatics tool using modern technologies: the case of the Cytoscape Project |
| 39 | Kieran O'Neill | Screw: tools for building reproducible single-cell epigenomics workflows |
| 40 | thomas cokelaer | Sequana: a set of flexible genomic pipelines for processing and reporting NGS analysis |
| 41 | Denis Yuen | The GA4GH Tool Registry Service (TRS) and Dockstore - Year One |
| 42 | Olga Vrousgou | The SPOT ontology toolkit : semantics as a service |
| 43 | Kenzo-Hugo Hillion | ToolDog - generating tool descriptors from the ELIXIR tool registry |
| 44 | Uros Sipeitc | Workflow for processing standard bioinformatics formats with SciClone to infer tumor heterogeneity |
| 45 | Steffen Möller | Workflow-ready bioinformatics packages for Debian-based distributions and this Linux distribution's infrastructure for low-friction reproducible research |
| 46 | Kevin Sayers | Workflows interoperability with Nextflow and Common WL |
