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BOSC 2007 Schedule
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Thursday July 19th
Friday July 20th
8:45am
Call To Order
Call To Order
9:00am
Keynote Speaker: Carole Goble
slides
[OS Software] Jan Taubert: The ONDEX Data Integration Framework
slides
9:20am
[OS Software] Subhashree Madhavan: CGEMS: An Open-Source caIntegrator Application to support Whole Genome Association Studies
9:40am
[OS Software] Eric Just: Modware: An Object-Oriented Perl Interface to the Chado Schema
slides
10:00
[New Technology] James Taylor: The Galaxy Framework for Computational Biology Tool Integration
slides
[OS Software] Ian Holmes: XRATE: Scheme-y trees, phylo-HMMs and phylo-grammars
10:20
[New Technology] Mitch Skinner: AJAX GBrowse: Community Genome Annotation Made Easy
slides
[OS Software] Kazuharu Arakawa: E-Cell 3D: 3-Dimensional Visualization Front-End for E-Cell Simulation Environment
10:30am
Coffee
Coffee
11:00am
[New Technology] Rafael C. Jimenez: Dasty2: A Web Client for Visualizing Protein Sequence Features
slides
[OS Software] Kam Dahlquist: XMLPipeDB: A Reusable, Open Source Tool Chain for Building Relational Databases from XML Sources
slides
11:20am
[New Technology] Taavi Hupponen: EMBRACE Web Services
slides
[Software Design And Engineering] Kam Dahlquist: An Open Source Framework for Teaching Bioinformatics
slides
11:40
[New Technology] Krishnakant Shanbhag: CaGrid Cancer Biomedical Informatics Grid
slides
[Software Design And Engineering] James Taylor: Tools to Facilitate Large Scale Comparative Genomic Analysis
http://www.slideshare.net/bosc/software-engineering
slides]
11:50
12:00
Lunch
Lunch
1:30pm
Martin Senger: BioMoby Project Update
[Lightning Talk] Eric Jain: beta.uniprot.org -- Another Piece of Life Sciences Infrastructure Built on Open Source Software
1:45pm
Tom Oinn: MyGrid/Taverna Project Update
[Lightning Talk] Toshiaki Katayama -- Introduction of the Japanese Open Bio* community
slides
2:00pm
Richard Holland: BioJava Project Update
[Lightning Talk] Kazuharu Arakawa -- G-Language Project
2:15pm
Arek Kasprzyk: BioMart Project Update
slides
[Lightning Talk] Henrik Abelsson: Mitrion-C Accellerated NCBI Blast Application
2:30pm
Peter Cock: BioPython Project Update
slides
[Lightning Talk] Shawn Houston: The Compute Portal Project
2:45
Toshiaki Katayama: BioRuby Project Update
slides
Interactive Wifi Workshops
3:00pm
Jason Stajich: BioPerl Project Update
slides
Interactive Wifi Workshops
3:15pm
Peter Rice: EMBOSS Project Update
Interactive Wifi Workshops
3:30pm
Coffee
Coffee
4:00pm
Glenn Proctor: Ensembl Project Update
Interactive Wifi Workshops
4:15pm
Discuss the Creation of an
OBF Distribution CD
Interactive Wifi Workshops
5:00pm
Interactive Wifi Workshops
Interactive Wifi Workshops
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