-

Difference between revisions of "Sambamba"

From Open Bioinformatics Foundation
Jump to: navigation, search
(Sambamba suppl. material)
Line 4: Line 4:
  
 
   https://github.com/lomereiter/sambamba
 
   https://github.com/lomereiter/sambamba
 +
 +
The Sambamba paper is currently under review. Supplementary material can be found [https://github.com/pjotrp/smb_performance here].

Revision as of 10:19, 20 December 2014

Sambamba is a high performance modern robust and fast tool (and library), written in the D programming language, for working with SAM, BAM and CRAM formats. Current parallelised functionality is an important subset of samtools functionality, including view, index, sort, markdup, mpileup and depth.

For more information see

 https://github.com/lomereiter/sambamba

The Sambamba paper is currently under review. Supplementary material can be found here.