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BOSC 2013

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Revision as of 17:08, 3 February 2013 by Nomi (talk) (→‎Cameron Neylon)
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The Bosc Pear
 The 14th Annual Bioinformatics Open Source Conference (BOSC 2013) will take place July 19-20, 2013, in Berlin, Germany, right before ISMB/ECCB 2013.

Important Dates

Overview

The Bioinformatics Open Source Conference (BOSC) is a satellite of ISMB. It is sponsored by the Open Bioinformatics Foundation (O|B|F), a non-profit group dedicated to promoting the practice and philosophy of Open Source software development within the biological research community.

Open Source software has flourished in the bioinformatics community for well over a decade. When the first BOSC (Bioinformatics Open Source Conference) was held in 2000, there were already a number of popular open source bioinformatics packages, and the number and range of these projects has increased dramatically since then. BOSC covers the wide range of open source bioinformatics software packages that have been successfully developed and adopted by the community, and encompasses the growing movement of Open Science, with its focus on transparency, reproducibility, and data provenance. We welcome submissions relating to all aspects of open source bioinformatics software and open science, including new computational methods, reusable software components, visualization, interoperability, and other approaches that help to advance research in the biomolecular sciences. Two full days of talks, posters, panel discussions, and informal discussion groups will enable BOSC attendees to interact with other developers and share ideas and code, as well as learning about some of the latest developments in the field of open source bioinformatics.

Please spread the word about BOSC--all are welcome. On Twitter, follow @BOSC2013 and use hash tag #bosc2013.

Session Topics

  • Cloud and Parallel Computing
  • Genome-scale Data Management
  • Software Interoperability
  • Open Science and Reproducible Research
  • Visualization
  • Bioinformatics Open Source Project Updates
  • Panel (TBD)

Keynote Speakers

Cameron Neylon

Cameron Neylon

Cameron Neylon is Advocacy Director for the Public Library of Science, a research biophysicist and well known agitator for opening up the process of research. He speaks regularly on issues of Open Science including Open Access publication, Open Data, and Open Source as well as the wider technical and social issues of applying the opportunities the internet brings to the practice of science. He was named as a SPARC Innovator in July 2010 for work on the Panton Principles and is a recipient of the Blue Obelisk for contributions to open data. He writes regularly at his blog, Science in the Open.

Cameron will speak about Network ready research: The role of open source and open thinking.

BOSC Open Source License Requirement

The Open Bioinformatics Foundation, which sponsors BOSC, is dedicated to promoting the practice and philosophy of Open Source Software Development within the biological research community. For this reason, if a submitted talk proposal concerns a specific software system for use by the research community, then that software must be licensed with a recognized Open Source License, and be available for download, including source code, by a tar/zip file accessed through ftp/http or through a widely used version control system like cvs/subversion/git/bazaar/Mercurial.

See the following websites for further information:

BOSC Organizing Committee

Chair

  • Nomi L. Harris (Lawrence Berkeley National Laboratory)

Members

Ex Officio (Members of the O|B|F Board)

Previous BOSCs

Contact Us

  • Follow BOSC on Twitter: @BOSC2013, #bosc2013
  • If you'd like to join the mailing list for BOSC-related announcements, including the call for abstracts and deadline reminders, please subscribe to the Bosc-announce list. This list has low traffic, and your address will be kept private.
  • If you have questions about the conference, or would like to volunteer to help out, please contact the organizers at bosc@open-bio.org.
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